--- Dependency check [begin] --- --- Dependency check [end] --- --- Distribution check [begin] --- Version 1.5.2 - 2021-08-11 (EO) Information: this ChangeLog entry matches the version number: Version 1.5.2 - 2021-08-11 (EO) Information: ./config/rgsframejumpfix.par is an XML parameter file, I cannot yet validate it. Skipped. Warning: rgsframejumpfix - missing lyt files. Now checking git repository... --- Distribution check [end] --- /workspaces/xmm_sas_ubuntu22.04/packages/sas/bin/sastaskhdr_gfortran rgsframejumpfix 1.5.2 rgsframejumpfix 22.0.0-7b8c5558a-20241011 > rgsframejumpfix.h /workspaces/xmm_sas_ubuntu22.04/packages/sas/bin/sastaskhimp rgsframejumpfix 1.5.2 rgsframejumpfix 22.0.0-7b8c5558a-20241011 > rgsframejumpfix_h_imp.cc T=rgsframejumpfix ;\ sed "s/taskname/$T/g" /workspaces/xmm_sas_ubuntu22.04/packages/taskmain/src/task_mod.f90 > rgsframejumpfix_f_mod.f90 T=rgsframejumpfix ;\ sed "s/taskname/$T/g" /workspaces/xmm_sas_ubuntu22.04/packages/taskmain/src/task_f.cc | sed "s/taskproc/$T_/g" > rgsframejumpfix_f.cc Dependencies for rgsframejumpfix g++ -c -Wall -DGFORTRAN -std=gnu++14 -g -fPIC -DUSE_OAL -DUSE_DAL -DUSE_POPUP -include /workspaces/xmm_sas_ubuntu22.04/include/config-std.h -imacros /workspaces/xmm_sas_ubuntu22.04/config.h -I/workspaces/xmm_sas_ubuntu22.04/include -I/workspaces/xmm_sas_ubuntu22.04/include/dal -I/workspaces/xmm_sas_ubuntu22.04/include/utils -I/sasbuild/tools/qt-x11-free/include -I. rgsframejumpfix_h_imp.cc In file included from /workspaces/xmm_sas_ubuntu22.04/include/DalRegister.h:27, from rgsframejumpfix_h_imp.cc:12: /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:423:27: warning: ‘virtual Attributable& Attributable::operator=(const Attributable&)’ was hidden [-Woverloaded-virtual=] 423 | virtual Attributable& operator=( const Attributable& ) = 0; | ^~~~~~~~ /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:547:22: note: by ‘virtual DataSet& DataSet::operator=(const DataSet&)’ 547 | virtual DataSet& operator=( const DataSet& ) = 0; | ^~~~~~~~ /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:423:27: warning: ‘virtual Attributable& Attributable::operator=(const Attributable&)’ was hidden [-Woverloaded-virtual=] 423 | virtual Attributable& operator=( const Attributable& ) = 0; | ^~~~~~~~ /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:600:7: note: by ‘Block& Block::operator=(const Block&)’ 600 | class Block : public virtual Attributable, public virtual Child | ^~~~~ /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:423:27: warning: ‘virtual Attributable& Attributable::operator=(const Attributable&)’ was hidden [-Woverloaded-virtual=] 423 | virtual Attributable& operator=( const Attributable& ) = 0; | ^~~~~~~~ /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:632:7: note: by ‘Table& Table::operator=(const Table&)’ 632 | class Table : public virtual Block, public virtual Seekable | ^~~~~ /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:423:27: warning: ‘virtual Attributable& Attributable::operator=(const Attributable&)’ was hidden [-Woverloaded-virtual=] 423 | virtual Attributable& operator=( const Attributable& ) = 0; | ^~~~~~~~ /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:730:7: note: by ‘Column& Column::operator=(const Column&)’ 730 | class Column : public virtual DataComponent, public virtual Attributable, public virtual Child, public virtual Seekable | ^~~~~~ /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:423:27: warning: ‘virtual Attributable& Attributable::operator=(const Attributable&)’ was hidden [-Woverloaded-virtual=] 423 | virtual Attributable& operator=( const Attributable& ) = 0; | ^~~~~~~~ /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:773:7: note: by ‘Array& Array::operator=(const Array&)’ 773 | class Array : public virtual DataComponent, public virtual Block, public virtual Seekable< longVec > | ^~~~~ gfortran -c -fimplicit-none -fno-range-check -DGFORTRAN -fallow-argument-mismatch -g -fPIC -I/workspaces/xmm_sas_ubuntu22.04/include -I/workspaces/xmm_sas_ubuntu22.04/include/dal -I/workspaces/xmm_sas_ubuntu22.04/include/utils rgsframejumpfix_f_mod.f90 g++ -c -Wall -DGFORTRAN -std=gnu++14 -g -fPIC -DUSE_OAL -DUSE_DAL -DUSE_POPUP -include /workspaces/xmm_sas_ubuntu22.04/include/config-std.h -imacros /workspaces/xmm_sas_ubuntu22.04/config.h -I/workspaces/xmm_sas_ubuntu22.04/include -I/workspaces/xmm_sas_ubuntu22.04/include/dal -I/workspaces/xmm_sas_ubuntu22.04/include/utils -I/sasbuild/tools/qt-x11-free/include -I. rgsframejumpfix_f.cc g++ -c -Wall -DGFORTRAN -std=gnu++14 -g -fPIC -DUSE_OAL -DUSE_DAL -DUSE_POPUP -include /workspaces/xmm_sas_ubuntu22.04/include/config-std.h -imacros /workspaces/xmm_sas_ubuntu22.04/config.h -I/workspaces/xmm_sas_ubuntu22.04/include -I/workspaces/xmm_sas_ubuntu22.04/include/dal -I/workspaces/xmm_sas_ubuntu22.04/include/utils -I/sasbuild/tools/qt-x11-free/include -I. rgsframejumpfix.cc In file included from /sasbuild/tools/gcc-13.3.0/include/c++/13.3.0/backward/strstream:50, from /workspaces/xmm_sas_ubuntu22.04/include/utils/stringutil.h:27, from /workspaces/xmm_sas_ubuntu22.04/include/utils/StringIntMap.h:97, from /workspaces/xmm_sas_ubuntu22.04/include/Odf.h:67, from /workspaces/xmm_sas_ubuntu22.04/include/TimeCorrelator.h:77, from /workspaces/xmm_sas_ubuntu22.04/include/OalServer.h:58, from rgsframejumpfix.cc:35: /sasbuild/tools/gcc-13.3.0/include/c++/13.3.0/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] 32 | #warning \ | ^~~~~~~ In file included from /workspaces/xmm_sas_ubuntu22.04/include/Xmm.h:117, from /workspaces/xmm_sas_ubuntu22.04/include/Odf.h:68: /workspaces/xmm_sas_ubuntu22.04/include/EarthPositionLocator.h:73:70: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 73 | const std::string &name = "Unknown") throw(BadLattitude); | ^~~~~ In file included from /workspaces/xmm_sas_ubuntu22.04/include/Odf.h:71: /workspaces/xmm_sas_ubuntu22.04/include/BadPixelMap.h:152:21: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 152 | public std::unary_function { | ^~~~~~~~~~~~~~ In file included from /sasbuild/tools/gcc-13.3.0/include/c++/13.3.0/string:49, from /workspaces/xmm_sas_ubuntu22.04/include/param.h:32, from /workspaces/xmm_sas_ubuntu22.04/include/Task.h:26, from rgsframejumpfix.h:11, from rgsframejumpfix.cc:30: /sasbuild/tools/gcc-13.3.0/include/c++/13.3.0/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ In file included from /workspaces/xmm_sas_ubuntu22.04/include/Image.h:56, from /workspaces/xmm_sas_ubuntu22.04/include/Odf.h:72: /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:423:27: warning: ‘virtual Attributable& Attributable::operator=(const Attributable&)’ was hidden [-Woverloaded-virtual=] 423 | virtual Attributable& operator=( const Attributable& ) = 0; | ^~~~~~~~ /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:547:22: note: by ‘virtual DataSet& DataSet::operator=(const DataSet&)’ 547 | virtual DataSet& operator=( const DataSet& ) = 0; | ^~~~~~~~ /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:423:27: warning: ‘virtual Attributable& Attributable::operator=(const Attributable&)’ was hidden [-Woverloaded-virtual=] 423 | virtual Attributable& operator=( const Attributable& ) = 0; | ^~~~~~~~ /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:600:7: note: by ‘Block& Block::operator=(const Block&)’ 600 | class Block : public virtual Attributable, public virtual Child | ^~~~~ /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:423:27: warning: ‘virtual Attributable& Attributable::operator=(const Attributable&)’ was hidden [-Woverloaded-virtual=] 423 | virtual Attributable& operator=( const Attributable& ) = 0; | ^~~~~~~~ /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:632:7: note: by ‘Table& Table::operator=(const Table&)’ 632 | class Table : public virtual Block, public virtual Seekable | ^~~~~ /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:423:27: warning: ‘virtual Attributable& Attributable::operator=(const Attributable&)’ was hidden [-Woverloaded-virtual=] 423 | virtual Attributable& operator=( const Attributable& ) = 0; | ^~~~~~~~ /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:730:7: note: by ‘Column& Column::operator=(const Column&)’ 730 | class Column : public virtual DataComponent, public virtual Attributable, public virtual Child
, public virtual Seekable | ^~~~~~ /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:423:27: warning: ‘virtual Attributable& Attributable::operator=(const Attributable&)’ was hidden [-Woverloaded-virtual=] 423 | virtual Attributable& operator=( const Attributable& ) = 0; | ^~~~~~~~ /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:773:7: note: by ‘Array& Array::operator=(const Array&)’ 773 | class Array : public virtual DataComponent, public virtual Block, public virtual Seekable< longVec > | ^~~~~ rgsframejumpfix.cc: In function ‘void rgsframejumpfix()’: rgsframejumpfix.cc:97:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 97 | for (int i = 0; i < rawTable->rows()-1; ++i) | ~~^~~~~~~~~~~~~~~~~~~~ rgsframejumpfix.cc:176:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 176 | for (int i = 0; i < rawTable->rows()-1; ++i) | ~~^~~~~~~~~~~~~~~~~~~~ rgsframejumpfix.cc:52:10: warning: unused variable ‘N’ [-Wunused-variable] 52 | unsigned N = oalServer.odf()->exposures(); | ^ rgsframejumpfix.cc: In function ‘void removeDuplicatedFrames(DataSet*, const OdfSet*)’: rgsframejumpfix.cc:256:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 256 | for (int i = 0; i < rawTable->rows(); ++i) | ~~^~~~~~~~~~~~~~~~~~ rgsframejumpfix.cc:263:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 263 | for (int i = 0; i < framesVec.size() ; ++i) { | ~~^~~~~~~~~~~~~~~~~~ rgsframejumpfix.cc:270:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 270 | for (int i = 0; i < duplicatedFrames.size() ; ++i) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ rgsframejumpfix.cc:273:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 273 | for (int j = 0; j < rawTable->rows(); ++j) | ~~^~~~~~~~~~~~~~~~~~ rgsframejumpfix.cc:247:14: warning: unused variable ‘duplicatedFlag’ [-Wunused-variable] 247 | bool duplicatedFlag = true; | ^~~~~~~~~~~~~~ rgsframejumpfix.cc: In function ‘void removeCorruptedFrames(DataSet*, const OdfSet*, std::map)’: rgsframejumpfix.cc:309:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 309 | for (int i = 0; i < rawTable->rows()-1; ++i) | ~~^~~~~~~~~~~~~~~~~~~~ rgsframejumpfix.cc: In function ‘void removeCorruptedFramesFromScienceFiles(std::map)’: rgsframejumpfix.cc:346:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 346 | if (std::stoi(ccdNR) == it->second) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ rgsframejumpfix.cc:364:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 364 | for (int i = 0; i < rawTable->rows()-1; ++i) | ~~^~~~~~~~~~~~~~~~~~~~ /usr/bin/ar cur librgsframejumpfix.a rgsframejumpfix_h_imp.o rgsframejumpfix_f_mod.o rgsframejumpfix_f.o rgsframejumpfix.o /usr/bin/ar: `u' modifier ignored since `D' is the default (see `U') ranlib librgsframejumpfix.a g++ -shared -Wl,-h,librgsframejumpfix.so.1.5 -Wl,-rpath,\$ORIGIN -Wl,-rpath,\$ORIGIN/../libextra -o librgsframejumpfix.so.1.5 rgsframejumpfix_h_imp.o rgsframejumpfix_f_mod.o rgsframejumpfix_f.o rgsframejumpfix.o -lmetatask -loal -ldal -lcaloalutils -lslatec -ldal -lparam -lselector -lcaloalutils -ldal -lslatec -lerror -lutils -lmetatask -L/sasbuild/tools/qt-x11-free/lib -lqt -lgfortran -lcfitsio -ldl -lm -L. T=rgsframejumpfix ;\ sed "s/taskname/$T/g" /workspaces/xmm_sas_ubuntu22.04/packages/taskmain/src/main.cc | sed "s/VERSION/1.5.2/g; s/RELEASE/22.0.0-7b8c5558a-20241011/g; s/PACKAGE/rgsframejumpfix/g" > rgsframejumpfix_main.cc g++ -c -Wall -DGFORTRAN -std=gnu++14 -g -DUSE_OAL -DUSE_DAL -DUSE_POPUP -include /workspaces/xmm_sas_ubuntu22.04/include/config-std.h -imacros /workspaces/xmm_sas_ubuntu22.04/config.h -I/workspaces/xmm_sas_ubuntu22.04/include -I/workspaces/xmm_sas_ubuntu22.04/include/dal -I/workspaces/xmm_sas_ubuntu22.04/include/utils -I/sasbuild/tools/qt-x11-free/include -I. rgsframejumpfix_main.cc In file included from /sasbuild/tools/gcc-13.3.0/include/c++/13.3.0/backward/strstream:50, from /workspaces/xmm_sas_ubuntu22.04/include/utils/stringutil.h:27, from rgsframejumpfix_main.cc:38: /sasbuild/tools/gcc-13.3.0/include/c++/13.3.0/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] 32 | #warning \ | ^~~~~~~ In file included from /workspaces/xmm_sas_ubuntu22.04/include/Xmm.h:117, from /workspaces/xmm_sas_ubuntu22.04/include/Odf.h:68, from /workspaces/xmm_sas_ubuntu22.04/include/TimeCorrelator.h:77, from /workspaces/xmm_sas_ubuntu22.04/include/OalServer.h:58, from rgsframejumpfix_main.cc:48: /workspaces/xmm_sas_ubuntu22.04/include/EarthPositionLocator.h:73:70: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 73 | const std::string &name = "Unknown") throw(BadLattitude); | ^~~~~ In file included from /workspaces/xmm_sas_ubuntu22.04/include/Odf.h:71: /workspaces/xmm_sas_ubuntu22.04/include/BadPixelMap.h:152:21: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 152 | public std::unary_function { | ^~~~~~~~~~~~~~ In file included from /sasbuild/tools/gcc-13.3.0/include/c++/13.3.0/string:49, from rgsframejumpfix_main.cc:31: /sasbuild/tools/gcc-13.3.0/include/c++/13.3.0/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ In file included from /workspaces/xmm_sas_ubuntu22.04/include/Image.h:56, from /workspaces/xmm_sas_ubuntu22.04/include/Odf.h:72: /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:423:27: warning: ‘virtual Attributable& Attributable::operator=(const Attributable&)’ was hidden [-Woverloaded-virtual=] 423 | virtual Attributable& operator=( const Attributable& ) = 0; | ^~~~~~~~ /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:547:22: note: by ‘virtual DataSet& DataSet::operator=(const DataSet&)’ 547 | virtual DataSet& operator=( const DataSet& ) = 0; | ^~~~~~~~ /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:423:27: warning: ‘virtual Attributable& Attributable::operator=(const Attributable&)’ was hidden [-Woverloaded-virtual=] 423 | virtual Attributable& operator=( const Attributable& ) = 0; | ^~~~~~~~ /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:600:7: note: by ‘Block& Block::operator=(const Block&)’ 600 | class Block : public virtual Attributable, public virtual Child | ^~~~~ /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:423:27: warning: ‘virtual Attributable& Attributable::operator=(const Attributable&)’ was hidden [-Woverloaded-virtual=] 423 | virtual Attributable& operator=( const Attributable& ) = 0; | ^~~~~~~~ /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:632:7: note: by ‘Table& Table::operator=(const Table&)’ 632 | class Table : public virtual Block, public virtual Seekable | ^~~~~ /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:423:27: warning: ‘virtual Attributable& Attributable::operator=(const Attributable&)’ was hidden [-Woverloaded-virtual=] 423 | virtual Attributable& operator=( const Attributable& ) = 0; | ^~~~~~~~ /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:730:7: note: by ‘Column& Column::operator=(const Column&)’ 730 | class Column : public virtual DataComponent, public virtual Attributable, public virtual Child
, public virtual Seekable | ^~~~~~ /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:423:27: warning: ‘virtual Attributable& Attributable::operator=(const Attributable&)’ was hidden [-Woverloaded-virtual=] 423 | virtual Attributable& operator=( const Attributable& ) = 0; | ^~~~~~~~ /workspaces/xmm_sas_ubuntu22.04/include/Dal.h:773:7: note: by ‘Array& Array::operator=(const Array&)’ 773 | class Array : public virtual DataComponent, public virtual Block, public virtual Seekable< longVec > | ^~~~~ g++ -Wl,-rpath,\$ORIGIN/../lib -Wl,-rpath,\$ORIGIN/../libextra -L/workspaces/xmm_sas_ubuntu22.04/lib -o rgsframejumpfix rgsframejumpfix_main.o -lrgsframejumpfix -lmetatask -loal -ldal -lcaloalutils -lslatec -ldal -lparam -lselector -lcaloalutils -ldal -lslatec -lerror -lutils -lmetatask -L/sasbuild/tools/qt-x11-free/lib -lqt -lgfortran -lcfitsio -ldl -lm -L. sed -e "s/DOC/rgsframejumpfix/" -e "s/TYPE/user/" < \ /workspaces/xmm_sas_ubuntu22.04/packages/sas/doc/lib/package.tex | /workspaces/xmm_sas_ubuntu22.04/packages/sas/bin/texcombine | \ /workspaces/xmm_sas_ubuntu22.04/packages/sas/bin/fixdoc -type=user rgsframejumpfix 1.5.2 rgsframejumpfix 22.0.0-7b8c5558a-20241011 > rgsframejumpfix.tex including sasuser... including sasglobal... including rgsframejumpfix_description... latex rgsframejumpfix < /dev/null > makedoc.log || ( cat makedoc.log ; exit 1 ) bibtex rgsframejumpfix < /dev/null > makedoc.log make[5]: [/workspaces/xmm_sas_ubuntu22.04/Make.include:1062: rgsframejumpfix.ps.gz] Error 2 (ignored) latex rgsframejumpfix < /dev/null > makedoc.log || ( cat makedoc.log ; exit 1 ) latex rgsframejumpfix < /dev/null > makedoc.log || ( cat makedoc.log ; exit 1 ) dvips -o rgsframejumpfix.ps rgsframejumpfix > makedoc.log 2>&1 || ( cat makedoc.log ; exit 1 ) dvipdf rgsframejumpfix > makedoc.log 2>&1 || ( cat makedoc.log ; continue ) gzip -f rgsframejumpfix.ps SASRELDIR=../../.. ;\ export SASRELDIR ;\ latex2html -nouse_pdftex -init_file /workspaces/xmm_sas_ubuntu22.04/packages/sas/doc/lib/latex2html.init rgsframejumpfix > /dev/null texexpand V2020 (Released January 1, 2020) Warning: No implementation found for option: `version' for `sasdoc' package Warning: No implementation found for option: `version' for `sasdoc' package /usr/bin/echo "" mkpkgidx -t . > /dev/null || (rm -f rgsframejumpfix/index.pl ; exit 1) pointer=rgsframejumpfix/ChangeLog ; \ target=../../../packages/rgsframejumpfix/ChangeLog ; \ if [ -f $target -a \( ! -h $pointer \) ] ; then \ ln -s ../$target $pointer ; \ fi rm rgsframejumpfix.tex Testing notest ... passed